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Book from top Apart-hotels in Shinjuku, Tokyo that are both affordable and excellent choice for accommodation. The rooms are meticulously clean and offer utmost comfort, along with top-notch amenities that will serve as excellent options for your stay. Now is the perfect time to explore, book Apart-hotels in Shinjuku, Tokyo starting from AED 232 and grab exclusive deals and discounts. Additional offers on selected Tokyo Hotels at the best prices. Get Up to 20% OFF* (up to AED 400) hotel booking in Tokyo with MakeMyTrip using coupon code : “SUPERSAVER”. View More
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605 Properties in Shinjuku

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Stay SAKURA Tokyo Shinjuku Hyaku kura

Shinjuku | 4.2 km drive to Shinjuku Gyoen National Garden
Apartment
| 1 Bedroom | Sleeps 4 guests
Hurry! only 1 room left at this price
Excellent4.4

(63 Ratings)

MYR 1,110

+ MYR 111 taxes & fees

Per Night

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East One

Shinjuku | 3.2 km drive to Shinjuku Gyoen National Garden
5 minutes walk to Higashi-Shinjuku Station,
| Sleeps 5 guests
Free Cancellation
Hurry! only 1 room left at this price
Excellent4.7

(9 Ratings)

MYR 1,747

+ MYR 329 taxes & fees

Per Night

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Entire Apartment

M/W HOTEL

Shinjuku | 9 minutes walk to Shinjuku Gyoen National Garden
6 minutes walk to Shinjuku-gyoemmae Station,
Entire Apartment
| Sleeps 8 guests
Entire Apartment

Entire Apartment

Entire Property

Get complete access to all bedrooms, bathrooms, living room, kitchen and more!

Please refer to Property Layout section on the Details page for access information for All spaces

Elevator/LiftElevator/Lift
Free Cancellation
Hurry! only 1 room left at this price
Excellent4.3

(46 Ratings)

MYR 1,362

+ MYR 571 taxes & fees

Per Night

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Rhodes Kagurazaka Hotel

Shinjuku | 3.8 km drive to Shinjuku Gyoen National Garden
4 minutes walk to Ushigome-kagurazaka Station,
| Sleeps 2 guests
KitchenetteKitchenette
Refrigerator
Washing MachineWashing Machine
Free Cancellation
Hurry! only last few rooms left at this price
Very Good3.6

(104 Ratings)

MYR 521

+ MYR 52 taxes & fees

Per Night

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Sophiearth Apartment

Shinjuku | 3 km drive to Shinjuku Gyoen National Garden
5 minutes walk to Higashi - Shinjuku,
Apartment
| Sleeps 3 guests
Elevator/LiftElevator/Lift
Hurry! only 1 room left at this price
Good3.0

(137 Ratings)

MYR 313

+ MYR 66 taxes & fees

Per Night

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Entire Apartment

Everynet Shinjuku

Shinjuku | 1.8 km drive to Shinjuku Gyoen National Garden
6 minutes walk to Shinjuku-sanchome Station,
Entire Apartment
| 1 Bedroom | Sleeps 2 guests
Entire Apartment

Entire Apartment

Entire Property

Get complete access to all bedrooms, bathrooms, living room, kitchen and more!

Please refer to Property Layout section on the Details page for access information for All spaces

Free Wi-FiFree Wi-Fi
Free Cancellation
Hurry! only 1 room left at this price

MYR 830

+ MYR 280 taxes & fees

Per Night

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Entire Apartment

Hotel ICHIGAYA(JR Ichigaya Sta.)

Shinjuku | 10 minutes walk to Shinjuku Gyoen National Garden
2 minutes walk to Ichigaya Station,
Entire Apartment
| 1 Bedroom | Sleeps 2 guests
Entire Apartment

Entire Apartment

Entire Property

Get complete access to all bedrooms, bathrooms, living room, kitchen and more!

Please refer to Property Layout section on the Details page for access information for All spaces

Free Wi-FiFree Wi-Fi
Hurry! only 1 room left at this price
Very Good3.8

(42 Ratings)

MYR 681

+ MYR 231 taxes & fees

Per Night

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Entire Apartment

Hermitage Nishi Shinjuku

Shinjuku | 4 km drive to Shinjuku Gyoen National Garden
5 minutes walk to Nishi-Shinjuku-Gochome Station,
Entire Apartment
| 1 Bedroom | Sleeps 6 guests
Entire Apartment

Entire Apartment

Entire Property

Get complete access to all bedrooms, bathrooms, living room, kitchen and more!

Please refer to Property Layout section on the Details page for access information for All spaces

Free Wi-FiFree Wi-Fi
Hurry! only 1 room left at this price
Good3.3

(260 Ratings)

MYR 966

+ MYR 307 taxes & fees

Per Night

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Entire Apartment

J-ARC Akebonobashi

Shinjuku | 1.8 km drive to Shinjuku Gyoen National Garden
About a minute walk to Akebonobashi Station,
Entire Apartment
| Sleeps 2 guests
Entire Apartment

Entire Apartment

Entire Property

Get complete access to all bedrooms, bathrooms, living room, kitchen and more!

Please refer to Property Layout section on the Details page for access information for All spaces

Free Wi-FiFree Wi-Fi
Hurry! only 1 room left at this price
Very Good4.0

(34 Ratings)

MYR 542

+ MYR 363 taxes & fees

Per Night

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Apart-hotels in Shinjuku, Tokyo - Apart-hotels Booking and other information

Are you looking for Apart-hotels in Shinjuku Tokyo, your search ends here. Discover the finest selection of Apart-hotels in Shinjuku Tokyo and save up to 50% on your booking at MakeMyTrip. Choose from a wide range of 13 Apart-hotels in Shinjuku Tokyo, with prices starting from MYR 232 per night. Experience a comfortable stay with air-conditioned rooms, convenient on-site parking, fully equipped kitchens, free WiFi and all the modern amenities you desire.

Stay updated with real-time prices for Apart-hotels in Shinjuku on MakeMyTrip. All above listings for Shinjuku Tokyo have been recently updated on Tuesday, October 21, 2025- 06.17.

Secure your booking for affordable Apart-hotels in Shinjuku Tokyo now, with discounted prices available exclusively on MakeMyTrip.com.